Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ApoeP08226 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Gm11249-201ENSMUST00000117071 859 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Gm10517-202ENSMUST00000192970 758 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Gm37025-201ENSMUST00000195159 829 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Gm42569-201ENSMUST00000200539 472 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Gm42545-201ENSMUST00000202755 922 ntBASIC15.73■□□□□ 0.11
ApoeP08226 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
ApoeP08226 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
ApoeP08226 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
ApoeP08226 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
ApoeP08226 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ApoeP08226 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ApoeP08226 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ApoeP08226 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
ApoeP08226 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.72■□□□□ 0.11
ApoeP08226 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
ApoeP08226 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
ApoeP08226 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
ApoeP08226 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
ApoeP08226 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.71■□□□□ 0.11
ApoeP08226 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.71■□□□□ 0.11
ApoeP08226 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Gm13158-201ENSMUST00000122007 736 ntBASIC15.71■□□□□ 0.11
ApoeP08226 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.71■□□□□ 0.11
ApoeP08226 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.71■□□□□ 0.11
ApoeP08226 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.71■□□□□ 0.11
ApoeP08226 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.71■□□□□ 0.11
ApoeP08226 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
ApoeP08226 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.71■□□□□ 0.11
ApoeP08226 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
ApoeP08226 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
ApoeP08226 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
ApoeP08226 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.7■□□□□ 0.1
ApoeP08226 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
ApoeP08226 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Gm12382-201ENSMUST00000122005 922 ntBASIC15.7■□□□□ 0.1
ApoeP08226 Gm27000-201ENSMUST00000182943 842 ntBASIC15.7■□□□□ 0.1
ApoeP08226 Gm37292-201ENSMUST00000192062 758 ntBASIC15.7■□□□□ 0.1
ApoeP08226 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.7■□□□□ 0.1
ApoeP08226 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ApoeP08226 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ApoeP08226 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ApoeP08226 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ApoeP08226 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms