Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Gm10052-201ENSMUST00000168019 960 ntBASIC16.3■□□□□ 0.2
Hoxa4P06798 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.3■□□□□ 0.2
Hoxa4P06798 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Gm7729-201ENSMUST00000050143 801 ntBASIC16.3■□□□□ 0.2
Hoxa4P06798 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Hoxa4P06798 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.3■□□□□ 0.2
Hoxa4P06798 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Hoxa4P06798 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Hoxa4P06798 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.3■□□□□ 0.2
Hoxa4P06798 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Hoxa4P06798 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Hoxa4P06798 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.28■□□□□ 0.2
Hoxa4P06798 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Gm7284-201ENSMUST00000131667 944 ntBASIC16.28■□□□□ 0.2
Hoxa4P06798 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Hoxa4P06798 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Hoxa4P06798 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.28■□□□□ 0.2
Hoxa4P06798 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.28■□□□□ 0.2
Hoxa4P06798 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hoxa4P06798 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Gm14859-201ENSMUST00000117752 357 ntBASIC16.27■□□□□ 0.2
Hoxa4P06798 Olfr129-201ENSMUST00000122318 993 ntBASIC16.27■□□□□ 0.2
Hoxa4P06798 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.27■□□□□ 0.2
Hoxa4P06798 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hoxa4P06798 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hoxa4P06798 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa4P06798 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa4P06798 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.27■□□□□ 0.19
Hoxa4P06798 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa4P06798 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hoxa4P06798 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Hoxa4P06798 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Hoxa4P06798 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hoxa4P06798 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.26■□□□□ 0.19
Hoxa4P06798 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hoxa4P06798 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Gm27357-201ENSMUST00000183754 135 ntBASIC16.26■□□□□ 0.19
Hoxa4P06798 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hoxa4P06798 Gm21362-201ENSMUST00000194272 928 ntBASIC16.26■□□□□ 0.19
Hoxa4P06798 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hoxa4P06798 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hoxa4P06798 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.26■□□□□ 0.19
Hoxa4P06798 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms