Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.32■□□□□ 0.04
P06336 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P06336 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P06336 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.31■□□□□ 0.04
P06336 Gm6659-201ENSMUST00000174752 547 ntBASIC15.31■□□□□ 0.04
P06336 Gm37722-201ENSMUST00000193757 208 ntBASIC15.31■□□□□ 0.04
P06336 Gm44450-201ENSMUST00000199528 114 ntBASIC15.31■□□□□ 0.04
P06336 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.31■□□□□ 0.04
P06336 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
P06336 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.31■□□□□ 0.04
P06336 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
P06336 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P06336 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.3■□□□□ 0.04
P06336 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
P06336 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.3■□□□□ 0.04
P06336 Gm23634-201ENSMUST00000175071 91 ntBASIC15.3■□□□□ 0.04
P06336 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
P06336 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.3■□□□□ 0.04
P06336 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
P06336 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
P06336 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
P06336 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
P06336 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.29■□□□□ 0.04
P06336 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.29■□□□□ 0.04
P06336 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
P06336 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.28■□□□□ 0.04
P06336 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.28■□□□□ 0.04
P06336 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.28■□□□□ 0.04
P06336 Gm18421-201ENSMUST00000204122 625 ntBASIC15.28■□□□□ 0.04
P06336 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.28■□□□□ 0.04
P06336 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.28■□□□□ 0.04
P06336 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
P06336 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
P06336 Cxcl14-202ENSMUST00000224801 1467 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms