Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.16■□□□□ 0.02
P01852 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
P01852 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.15■□□□□ 0.02
P01852 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 AA414768-201ENSMUST00000121924 1257 ntBASIC15.15■□□□□ 0.02
P01852 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.15■□□□□ 0.02
P01852 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
P01852 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P01852 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
P01852 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
P01852 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
P01852 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
P01852 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
P01852 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Gm13186-201ENSMUST00000118031 316 ntBASIC15.14■□□□□ 0.01
P01852 Gm11355-201ENSMUST00000121120 306 ntBASIC15.14■□□□□ 0.01
P01852 Gm9013-201ENSMUST00000132939 882 ntBASIC15.14■□□□□ 0.01
P01852 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.14■□□□□ 0.01
P01852 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.14■□□□□ 0.01
P01852 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.14■□□□□ 0.01
P01852 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.14■□□□□ 0.01
P01852 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.14■□□□□ 0.01
P01852 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.14■□□□□ 0.01
P01852 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
P01852 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.14■□□□□ 0.01
P01852 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
P01852 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
P01852 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.13■□□□□ 0.01
P01852 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.13■□□□□ 0.01
P01852 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P01852 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
P01852 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Gm25016-201ENSMUST00000158399 131 ntBASIC15.13■□□□□ 0.01
P01852 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.13■□□□□ 0.01
P01852 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
P01852 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.13■□□□□ 0.01
P01852 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
P01852 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
P01852 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P01852 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms