Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Gm27357-201ENSMUST00000183754 135 ntBASIC17.88■□□□□ 0.45
Vti1aO89116 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.88■□□□□ 0.45
Vti1aO89116 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.88■□□□□ 0.45
Vti1aO89116 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Vti1aO89116 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.88■□□□□ 0.45
Vti1aO89116 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Vti1aO89116 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vti1aO89116 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Vti1aO89116 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.87■□□□□ 0.45
Vti1aO89116 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.87■□□□□ 0.45
Vti1aO89116 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vti1aO89116 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Vti1aO89116 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Vti1aO89116 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.86■□□□□ 0.45
Vti1aO89116 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Olfr129-201ENSMUST00000122318 993 ntBASIC17.86■□□□□ 0.45
Vti1aO89116 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.86■□□□□ 0.45
Vti1aO89116 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Vti1aO89116 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Vti1aO89116 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Vti1aO89116 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Vti1aO89116 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Vti1aO89116 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Gm11336-201ENSMUST00000118168 334 ntBASIC17.84■□□□□ 0.45
Vti1aO89116 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Vti1aO89116 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.84■□□□□ 0.45
Vti1aO89116 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Vti1aO89116 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vti1aO89116 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.45
Vti1aO89116 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vti1aO89116 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vti1aO89116 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Vti1aO89116 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Vti1aO89116 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Vti1aO89116 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.83■□□□□ 0.44
Vti1aO89116 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.83■□□□□ 0.44
Vti1aO89116 Gm18115-201ENSMUST00000221209 621 ntBASIC17.83■□□□□ 0.44
Vti1aO89116 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Vti1aO89116 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Vti1aO89116 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Vti1aO89116 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Vti1aO89116 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Vti1aO89116 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms