Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm44359-201ENSMUST00000200671 138 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm13830-205ENSMUST00000201195 1155 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Gm6376-201ENSMUST00000209407 580 ntBASIC20.22■□□□□ 0.83
Cops6O88545 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.22■□□□□ 0.83
Cops6O88545 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cops6O88545 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cops6O88545 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Cops6O88545 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Cops6O88545 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.21■□□□□ 0.83
Cops6O88545 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.21■□□□□ 0.83
Cops6O88545 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Cops6O88545 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cops6O88545 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
Cops6O88545 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.2■□□□□ 0.82
Cops6O88545 Gm7862-201ENSMUST00000121461 292 ntBASIC20.2■□□□□ 0.82
Cops6O88545 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.2■□□□□ 0.82
Cops6O88545 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Cops6O88545 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC20.2■□□□□ 0.82
Cops6O88545 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cops6O88545 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Cops6O88545 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Cops6O88545 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cops6O88545 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Gm9449-201ENSMUST00000207265 1011 ntBASIC20.19■□□□□ 0.82
Cops6O88545 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC20.19■□□□□ 0.82
Cops6O88545 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cops6O88545 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cops6O88545 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cops6O88545 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Cops6O88545 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC20.18■□□□□ 0.82
Cops6O88545 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Cops6O88545 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cops6O88545 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cops6O88545 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
Cops6O88545 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Gm25745-201ENSMUST00000174945 133 ntBASIC20.18■□□□□ 0.82
Cops6O88545 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC20.18■□□□□ 0.82
Cops6O88545 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cops6O88545 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
Cops6O88545 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Cops6O88545 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
Cops6O88545 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cops6O88545 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.18■□□□□ 0.82
Cops6O88545 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cops6O88545 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms