Protein–RNA interactions for Protein: O88543

Cops3, COP9 signalosome complex subunit 3, mousemouse

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops3O88543 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Cops3O88543 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Cops3O88543 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cops3O88543 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cops3O88543 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cops3O88543 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Gm27000-201ENSMUST00000182943 842 ntBASIC14.88□□□□□ -0.03
Cops3O88543 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.88□□□□□ -0.03
Cops3O88543 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.88□□□□□ -0.03
Cops3O88543 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cops3O88543 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Cops3O88543 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.87□□□□□ -0.03
Cops3O88543 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Cops3O88543 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cops3O88543 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.86□□□□□ -0.03
Cops3O88543 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.86□□□□□ -0.03
Cops3O88543 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.86□□□□□ -0.03
Cops3O88543 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cops3O88543 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.85□□□□□ -0.03
Cops3O88543 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.85□□□□□ -0.03
Cops3O88543 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Cops3O88543 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC14.85□□□□□ -0.03
Cops3O88543 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.85□□□□□ -0.03
Cops3O88543 Gm10698-201ENSMUST00000182663 604 ntBASIC14.85□□□□□ -0.03
Cops3O88543 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.85□□□□□ -0.03
Cops3O88543 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.85□□□□□ -0.03
Cops3O88543 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC14.85□□□□□ -0.03
Cops3O88543 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cops3O88543 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms