Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.74■□□□□ 0.11
Tgfbr3O88393 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.74■□□□□ 0.11
Tgfbr3O88393 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Tgfbr3O88393 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Gm12350-201ENSMUST00000121208 462 ntBASIC15.73■□□□□ 0.11
Tgfbr3O88393 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Tgfbr3O88393 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.72■□□□□ 0.11
Tgfbr3O88393 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.72■□□□□ 0.11
Tgfbr3O88393 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Tgfbr3O88393 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Tgfbr3O88393 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Tgfbr3O88393 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.71■□□□□ 0.1
Tgfbr3O88393 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tgfbr3O88393 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms