Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.55■■□□□ 1.04
Nid2O88322 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Nid2O88322 AC151286.1-201ENSMUST00000198489 145 ntBASIC21.55■■□□□ 1.04
Nid2O88322 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Nid2O88322 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Gm5648-201ENSMUST00000122244 1587 ntBASIC21.54■■□□□ 1.04
Nid2O88322 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.54■■□□□ 1.04
Nid2O88322 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC21.54■■□□□ 1.04
Nid2O88322 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Nid2O88322 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC21.54■■□□□ 1.04
Nid2O88322 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC21.54■■□□□ 1.04
Nid2O88322 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.54■■□□□ 1.04
Nid2O88322 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Nid2O88322 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.53■■□□□ 1.04
Nid2O88322 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC21.53■■□□□ 1.04
Nid2O88322 Mir3113-201ENSMUST00000175478 76 ntBASIC21.53■■□□□ 1.04
Nid2O88322 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC21.53■■□□□ 1.04
Nid2O88322 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Nid2O88322 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.52■■□□□ 1.04
Nid2O88322 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.52■■□□□ 1.04
Nid2O88322 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Gm26308-201ENSMUST00000157768 69 ntBASIC21.52■■□□□ 1.04
Nid2O88322 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC21.52■■□□□ 1.04
Nid2O88322 Ndufaf2-202ENSMUST00000223734 556 ntBASIC21.52■■□□□ 1.04
Nid2O88322 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Nid2O88322 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC21.51■■□□□ 1.03
Nid2O88322 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC21.51■■□□□ 1.03
Nid2O88322 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.51■■□□□ 1.03
Nid2O88322 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Nid2O88322 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.5■■□□□ 1.03
Nid2O88322 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
Nid2O88322 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC21.5■■□□□ 1.03
Nid2O88322 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Nid2O88322 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Nid2O88322 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.49■■□□□ 1.03
Nid2O88322 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC21.49■■□□□ 1.03
Nid2O88322 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC21.49■■□□□ 1.03
Nid2O88322 Gm36967-201ENSMUST00000193814 266 ntBASIC21.49■■□□□ 1.03
Nid2O88322 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC21.49■■□□□ 1.03
Nid2O88322 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Nid2O88322 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nid2O88322 H2af-ps-201ENSMUST00000119066 295 ntBASIC21.48■■□□□ 1.03
Nid2O88322 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC21.48■■□□□ 1.03
Nid2O88322 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC21.48■■□□□ 1.03
Nid2O88322 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC21.48■■□□□ 1.03
Nid2O88322 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC21.48■■□□□ 1.03
Nid2O88322 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Nid2O88322 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Nid2O88322 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nid2O88322 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
Nid2O88322 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Nid2O88322 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms