Protein–RNA interactions for Protein: O70309

Itgb5, Integrin beta-5, mousemouse

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb5O70309 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Itgb5O70309 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Itgb5O70309 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Itgb5O70309 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Itgb5O70309 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.35■□□□□ 0.53
Itgb5O70309 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.35■□□□□ 0.53
Itgb5O70309 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.35■□□□□ 0.53
Itgb5O70309 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC18.35■□□□□ 0.53
Itgb5O70309 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Itgb5O70309 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Itgb5O70309 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.34■□□□□ 0.53
Itgb5O70309 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.34■□□□□ 0.53
Itgb5O70309 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.34■□□□□ 0.53
Itgb5O70309 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Itgb5O70309 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Itgb5O70309 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Itgb5O70309 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.34■□□□□ 0.53
Itgb5O70309 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Itgb5O70309 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Itgb5O70309 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Itgb5O70309 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.33■□□□□ 0.53
Itgb5O70309 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.33■□□□□ 0.52
Itgb5O70309 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm43347-201ENSMUST00000200226 580 ntBASIC18.33■□□□□ 0.52
Itgb5O70309 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.33■□□□□ 0.52
Itgb5O70309 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Itgb5O70309 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.33■□□□□ 0.52
Itgb5O70309 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Itgb5O70309 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Itgb5O70309 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
Itgb5O70309 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Itgb5O70309 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Itgb5O70309 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb5O70309 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Gm27867-201ENSMUST00000184778 125 ntBASIC18.32■□□□□ 0.52
Itgb5O70309 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.32■□□□□ 0.52
Itgb5O70309 Gm36967-201ENSMUST00000193814 266 ntBASIC18.32■□□□□ 0.52
Itgb5O70309 Gm44454-201ENSMUST00000198541 138 ntBASIC18.32■□□□□ 0.52
Itgb5O70309 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.32■□□□□ 0.52
Itgb5O70309 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Itgb5O70309 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
Itgb5O70309 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.31■□□□□ 0.52
Itgb5O70309 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC18.31■□□□□ 0.52
Itgb5O70309 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.31■□□□□ 0.52
Itgb5O70309 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.31■□□□□ 0.52
Itgb5O70309 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Itgb5O70309 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Itgb5O70309 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Itgb5O70309 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms