Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp8O70138 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Mmp8O70138 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Mmp8O70138 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Gm11950-201ENSMUST00000121615 838 ntBASIC20.23■□□□□ 0.83
Mmp8O70138 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp8O70138 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp8O70138 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp8O70138 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Mmp8O70138 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp8O70138 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC20.22■□□□□ 0.83
Mmp8O70138 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Mmp8O70138 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mmp8O70138 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp8O70138 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp8O70138 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Mmp8O70138 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp8O70138 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp8O70138 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Mmp8O70138 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Gm36967-201ENSMUST00000193814 266 ntBASIC20.21■□□□□ 0.83
Mmp8O70138 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp8O70138 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp8O70138 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp8O70138 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Mmp8O70138 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC20.2■□□□□ 0.82
Mmp8O70138 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Mmp8O70138 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Mmp8O70138 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.2■□□□□ 0.82
Mmp8O70138 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp8O70138 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Mmp8O70138 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp8O70138 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Mmp8O70138 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp8O70138 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms