Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rpl35aO55142 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 AA414768-201ENSMUST00000121924 1257 ntBASIC12.37□□□□□ -0.43
Rpl35aO55142 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.37□□□□□ -0.43
Rpl35aO55142 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Rpl35aO55142 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.37□□□□□ -0.43
Rpl35aO55142 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rpl35aO55142 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rpl35aO55142 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Gm26039-201ENSMUST00000158152 144 ntBASIC12.36□□□□□ -0.43
Rpl35aO55142 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.36□□□□□ -0.43
Rpl35aO55142 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rpl35aO55142 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.35□□□□□ -0.43
Rpl35aO55142 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Rpl35aO55142 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rpl35aO55142 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms