Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Pde6dO55057 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.15□□□□□ -0.3
Pde6dO55057 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pde6dO55057 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Pde6dO55057 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.15□□□□□ -0.3
Pde6dO55057 AC140264.2-202ENSMUST00000218746 817 ntBASIC13.15□□□□□ -0.3
Pde6dO55057 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pde6dO55057 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pde6dO55057 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pde6dO55057 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
Pde6dO55057 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pde6dO55057 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pde6dO55057 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
Pde6dO55057 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.14□□□□□ -0.31
Pde6dO55057 Mir2861-201ENSMUST00000175539 82 ntBASIC13.14□□□□□ -0.31
Pde6dO55057 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pde6dO55057 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
Pde6dO55057 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pde6dO55057 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pde6dO55057 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pde6dO55057 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pde6dO55057 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pde6dO55057 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Pde6dO55057 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Gm13234-201ENSMUST00000120010 747 ntBASIC13.13□□□□□ -0.31
Pde6dO55057 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pde6dO55057 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pde6dO55057 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pde6dO55057 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pde6dO55057 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Gm11643-201ENSMUST00000119578 864 ntBASIC13.12□□□□□ -0.31
Pde6dO55057 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.12□□□□□ -0.31
Pde6dO55057 Zfp783-201ENSMUST00000095946 670 ntBASIC13.12□□□□□ -0.31
Pde6dO55057 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC13.12□□□□□ -0.31
Pde6dO55057 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pde6dO55057 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
Pde6dO55057 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pde6dO55057 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pde6dO55057 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms