Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Dkk1O54908 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Dkk1O54908 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Dkk1O54908 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Dkk1O54908 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Dkk1O54908 Gm38325-201ENSMUST00000194507 1377 ntBASIC14.6□□□□□ -0.07
Dkk1O54908 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Dkk1O54908 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.59□□□□□ -0.07
Dkk1O54908 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.59□□□□□ -0.07
Dkk1O54908 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Dkk1O54908 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.59□□□□□ -0.07
Dkk1O54908 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC14.59□□□□□ -0.07
Dkk1O54908 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.59□□□□□ -0.07
Dkk1O54908 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Dkk1O54908 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Dkk1O54908 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Dkk1O54908 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Dkk1O54908 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Dkk1O54908 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Dkk1O54908 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Dkk1O54908 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.58□□□□□ -0.08
Dkk1O54908 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.58□□□□□ -0.08
Dkk1O54908 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Dkk1O54908 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Dkk1O54908 Gm2274-201ENSMUST00000184539 609 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
Dkk1O54908 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.58□□□□□ -0.08
Dkk1O54908 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Dkk1O54908 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.58□□□□□ -0.08
Dkk1O54908 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Dkk1O54908 CT030185.2-201ENSMUST00000222614 1310 ntBASIC14.58□□□□□ -0.08
Dkk1O54908 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Dkk1O54908 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Dkk1O54908 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Dkk1O54908 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Dkk1O54908 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Dkk1O54908 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Gm16061-201ENSMUST00000122167 857 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Gm11233-201ENSMUST00000122357 634 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC14.57□□□□□ -0.08
Dkk1O54908 Gm43952-201ENSMUST00000203765 751 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC14.57□□□□□ -0.08
Dkk1O54908 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Olfr1260-201ENSMUST00000061830 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Dkk1O54908 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Dkk1O54908 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms