Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
ChkaO54804 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.76■□□□□ 0.27
ChkaO54804 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
ChkaO54804 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ChkaO54804 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.76■□□□□ 0.27
ChkaO54804 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ChkaO54804 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
ChkaO54804 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.75■□□□□ 0.27
ChkaO54804 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.75■□□□□ 0.27
ChkaO54804 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.75■□□□□ 0.27
ChkaO54804 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ChkaO54804 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.75■□□□□ 0.27
ChkaO54804 Gm43353-201ENSMUST00000199224 1295 ntBASIC16.75■□□□□ 0.27
ChkaO54804 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
ChkaO54804 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.75■□□□□ 0.27
ChkaO54804 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ChkaO54804 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ChkaO54804 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ChkaO54804 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
ChkaO54804 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ChkaO54804 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.74■□□□□ 0.27
ChkaO54804 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.74■□□□□ 0.27
ChkaO54804 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ChkaO54804 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.74■□□□□ 0.27
ChkaO54804 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ChkaO54804 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
ChkaO54804 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
ChkaO54804 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.72■□□□□ 0.27
ChkaO54804 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
ChkaO54804 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ChkaO54804 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ChkaO54804 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.72■□□□□ 0.27
ChkaO54804 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.72■□□□□ 0.27
ChkaO54804 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.72■□□□□ 0.27
ChkaO54804 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ChkaO54804 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ChkaO54804 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ChkaO54804 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.71■□□□□ 0.27
ChkaO54804 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ChkaO54804 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms