Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Sptlc1O35704 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Gm28510-201ENSMUST00000190572 928 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.12■□□□□ 0.49
Sptlc1O35704 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Sptlc1O35704 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.11■□□□□ 0.49
Sptlc1O35704 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Gm27867-201ENSMUST00000184778 125 ntBASIC18.11■□□□□ 0.49
Sptlc1O35704 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.11■□□□□ 0.49
Sptlc1O35704 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Sptlc1O35704 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Sptlc1O35704 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Sptlc1O35704 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Sptlc1O35704 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Sptlc1O35704 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.09■□□□□ 0.49
Sptlc1O35704 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.09■□□□□ 0.49
Sptlc1O35704 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.09■□□□□ 0.49
Sptlc1O35704 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Sptlc1O35704 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.08■□□□□ 0.49
Sptlc1O35704 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sptlc1O35704 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Sptlc1O35704 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sptlc1O35704 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Gm15165-201ENSMUST00000118140 502 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.08■□□□□ 0.48
Sptlc1O35704 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.08■□□□□ 0.48
Sptlc1O35704 Gm44454-201ENSMUST00000198541 138 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 Gm6443-201ENSMUST00000203599 874 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 Gm44136-201ENSMUST00000203819 1106 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 AW822252-206ENSMUST00000208904 237 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.08■□□□□ 0.48
Sptlc1O35704 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
Sptlc1O35704 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Sptlc1O35704 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms