Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.63■□□□□ 0.25
Phox2bO35690 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.63■□□□□ 0.25
Phox2bO35690 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.63■□□□□ 0.25
Phox2bO35690 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.63■□□□□ 0.25
Phox2bO35690 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Phox2bO35690 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Phox2bO35690 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Phox2bO35690 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.63■□□□□ 0.25
Phox2bO35690 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Phox2bO35690 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.63■□□□□ 0.25
Phox2bO35690 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Phox2bO35690 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.63■□□□□ 0.25
Phox2bO35690 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Phox2bO35690 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Gm27867-201ENSMUST00000184778 125 ntBASIC16.62■□□□□ 0.25
Phox2bO35690 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.62■□□□□ 0.25
Phox2bO35690 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Phox2bO35690 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Phox2bO35690 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Phox2bO35690 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.61■□□□□ 0.25
Phox2bO35690 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Phox2bO35690 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.61■□□□□ 0.25
Phox2bO35690 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.61■□□□□ 0.25
Phox2bO35690 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.61■□□□□ 0.25
Phox2bO35690 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Phox2bO35690 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.61■□□□□ 0.25
Phox2bO35690 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.61■□□□□ 0.25
Phox2bO35690 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Phox2bO35690 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Phox2bO35690 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.61■□□□□ 0.25
Phox2bO35690 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Phox2bO35690 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.6■□□□□ 0.25
Phox2bO35690 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC16.6■□□□□ 0.25
Phox2bO35690 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Gm15590-201ENSMUST00000078419 552 ntBASIC16.6■□□□□ 0.25
Phox2bO35690 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Phox2bO35690 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Phox2bO35690 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Phox2bO35690 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Phox2bO35690 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.59■□□□□ 0.25
Phox2bO35690 Gm5745-201ENSMUST00000183748 313 ntBASIC16.59■□□□□ 0.25
Phox2bO35690 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.59■□□□□ 0.25
Phox2bO35690 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Phox2bO35690 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.59■□□□□ 0.25
Phox2bO35690 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Phox2bO35690 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Phox2bO35690 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Phox2bO35690 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Phox2bO35690 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Phox2bO35690 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms