Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Slc1a6O35544 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.37■□□□□ 0.21
Slc1a6O35544 Gm43183-201ENSMUST00000200632 547 ntBASIC16.37■□□□□ 0.21
Slc1a6O35544 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.37■□□□□ 0.21
Slc1a6O35544 Gm9731-201ENSMUST00000209480 747 ntBASIC16.37■□□□□ 0.21
Slc1a6O35544 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.37■□□□□ 0.21
Slc1a6O35544 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.37■□□□□ 0.21
Slc1a6O35544 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Slc1a6O35544 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Slc1a6O35544 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Gm18666-201ENSMUST00000190039 958 ntBASIC16.36■□□□□ 0.21
Slc1a6O35544 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Slc1a6O35544 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Slc1a6O35544 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.35■□□□□ 0.21
Slc1a6O35544 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Slc1a6O35544 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.35■□□□□ 0.21
Slc1a6O35544 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.35■□□□□ 0.21
Slc1a6O35544 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Slc1a6O35544 Gm27275-201ENSMUST00000184318 272 ntBASIC16.35■□□□□ 0.21
Slc1a6O35544 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.35■□□□□ 0.21
Slc1a6O35544 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.35■□□□□ 0.21
Slc1a6O35544 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.35■□□□□ 0.21
Slc1a6O35544 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
Slc1a6O35544 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.34■□□□□ 0.21
Slc1a6O35544 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc1a6O35544 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Slc1a6O35544 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.34■□□□□ 0.21
Slc1a6O35544 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.34■□□□□ 0.21
Slc1a6O35544 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Slc1a6O35544 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Slc1a6O35544 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Slc1a6O35544 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc1a6O35544 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Slc1a6O35544 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Slc1a6O35544 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.33■□□□□ 0.2
Slc1a6O35544 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc1a6O35544 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.33■□□□□ 0.2
Slc1a6O35544 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc1a6O35544 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc1a6O35544 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Slc1a6O35544 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms