Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn6O35454 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.76■□□□□ 0.43
Clcn6O35454 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn6O35454 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC17.76■□□□□ 0.43
Clcn6O35454 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.76■□□□□ 0.43
Clcn6O35454 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC17.76■□□□□ 0.43
Clcn6O35454 Gm37856-201ENSMUST00000191634 999 ntBASIC17.76■□□□□ 0.43
Clcn6O35454 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Clcn6O35454 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.76■□□□□ 0.43
Clcn6O35454 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Clcn6O35454 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Clcn6O35454 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.75■□□□□ 0.43
Clcn6O35454 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.75■□□□□ 0.43
Clcn6O35454 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Clcn6O35454 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Clcn6O35454 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Clcn6O35454 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Gm11249-201ENSMUST00000117071 859 ntBASIC17.74■□□□□ 0.43
Clcn6O35454 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.74■□□□□ 0.43
Clcn6O35454 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.74■□□□□ 0.43
Clcn6O35454 Gm37469-201ENSMUST00000193728 890 ntBASIC17.74■□□□□ 0.43
Clcn6O35454 Gm38319-201ENSMUST00000194537 1266 ntBASIC17.74■□□□□ 0.43
Clcn6O35454 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.74■□□□□ 0.43
Clcn6O35454 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.74■□□□□ 0.43
Clcn6O35454 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Clcn6O35454 CT030185.2-201ENSMUST00000222614 1310 ntBASIC17.73■□□□□ 0.43
Clcn6O35454 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Gm13168-201ENSMUST00000121771 632 ntBASIC17.73■□□□□ 0.43
Clcn6O35454 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.73■□□□□ 0.43
Clcn6O35454 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Gm21489-201ENSMUST00000189668 818 ntBASIC17.73■□□□□ 0.43
Clcn6O35454 Gm42438-201ENSMUST00000197832 974 ntBASIC17.73■□□□□ 0.43
Clcn6O35454 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.73■□□□□ 0.43
Clcn6O35454 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Clcn6O35454 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.73■□□□□ 0.43
Clcn6O35454 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Clcn6O35454 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.72■□□□□ 0.43
Clcn6O35454 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clcn6O35454 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Clcn6O35454 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC17.72■□□□□ 0.43
Clcn6O35454 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clcn6O35454 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clcn6O35454 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.72■□□□□ 0.43
Clcn6O35454 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.72■□□□□ 0.43
Clcn6O35454 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Clcn6O35454 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.72■□□□□ 0.43
Clcn6O35454 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Clcn6O35454 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn6O35454 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn6O35454 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Clcn6O35454 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms