Protein–RNA interactions for Protein: O35426

Xbp1, X-box-binding protein 1, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xbp1O35426 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Xbp1O35426 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.15■□□□□ 0.34
Xbp1O35426 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.15■□□□□ 0.34
Xbp1O35426 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Xbp1O35426 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Xbp1O35426 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Xbp1O35426 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.14■□□□□ 0.34
Xbp1O35426 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Xbp1O35426 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Xbp1O35426 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Xbp1O35426 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Xbp1O35426 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Xbp1O35426 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.14■□□□□ 0.33
Xbp1O35426 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Xbp1O35426 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Xbp1O35426 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Xbp1O35426 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Xbp1O35426 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
Xbp1O35426 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Xbp1O35426 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Xbp1O35426 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.13■□□□□ 0.33
Xbp1O35426 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.13■□□□□ 0.33
Xbp1O35426 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.13■□□□□ 0.33
Xbp1O35426 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.13■□□□□ 0.33
Xbp1O35426 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
Xbp1O35426 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Xbp1O35426 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Xbp1O35426 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Xbp1O35426 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.12■□□□□ 0.33
Xbp1O35426 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Gm12527-201ENSMUST00000117967 564 ntBASIC17.12■□□□□ 0.33
Xbp1O35426 Gm18958-201ENSMUST00000174258 762 ntBASIC17.12■□□□□ 0.33
Xbp1O35426 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.12■□□□□ 0.33
Xbp1O35426 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Xbp1O35426 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.12■□□□□ 0.33
Xbp1O35426 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Xbp1O35426 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Xbp1O35426 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Gm10698-201ENSMUST00000182663 604 ntBASIC17.11■□□□□ 0.33
Xbp1O35426 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC17.11■□□□□ 0.33
Xbp1O35426 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.11■□□□□ 0.33
Xbp1O35426 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Xbp1O35426 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms