Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf11aO35305 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.87■□□□□ 0.45
Tnfrsf11aO35305 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf11aO35305 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf11aO35305 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Tnfrsf11aO35305 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Gm23634-201ENSMUST00000175071 91 ntBASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Tnfrsf11aO35305 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Gm6345-202ENSMUST00000180900 204 ntBASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Gm29707-201ENSMUST00000196325 491 ntBASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Tnfrsf11aO35305 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Tnfrsf11aO35305 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Tnfrsf11aO35305 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.83■□□□□ 0.44
Tnfrsf11aO35305 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms