Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.35□□□□□ -0.11
Gfra3O35118 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Gfra3O35118 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.35□□□□□ -0.11
Gfra3O35118 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Gfra3O35118 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Gfra3O35118 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Gfra3O35118 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Gfra3O35118 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Gfra3O35118 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Gfra3O35118 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gfra3O35118 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.33□□□□□ -0.11
Gfra3O35118 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gfra3O35118 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Gfra3O35118 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.33□□□□□ -0.12
Gfra3O35118 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.33□□□□□ -0.12
Gfra3O35118 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Gm44450-201ENSMUST00000199528 114 ntBASIC14.33□□□□□ -0.12
Gfra3O35118 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.33□□□□□ -0.12
Gfra3O35118 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Gfra3O35118 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.33□□□□□ -0.12
Gfra3O35118 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.33□□□□□ -0.12
Gfra3O35118 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.33□□□□□ -0.12
Gfra3O35118 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Gfra3O35118 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Gfra3O35118 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.32□□□□□ -0.12
Gfra3O35118 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.32□□□□□ -0.12
Gfra3O35118 Ank2-226ENSMUST00000189368 339 ntBASIC14.32□□□□□ -0.12
Gfra3O35118 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gfra3O35118 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gfra3O35118 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gfra3O35118 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.31□□□□□ -0.12
Gfra3O35118 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms