Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Sh3yl1O08641 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Gm18958-201ENSMUST00000174258 762 ntBASIC15.81■□□□□ 0.12
Sh3yl1O08641 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Sh3yl1O08641 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sh3yl1O08641 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.79■□□□□ 0.12
Sh3yl1O08641 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3yl1O08641 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Gm13474-201ENSMUST00000122466 815 ntBASIC15.78■□□□□ 0.12
Sh3yl1O08641 Gm22697-201ENSMUST00000175194 63 ntBASIC15.78■□□□□ 0.12
Sh3yl1O08641 Gm18032-201ENSMUST00000222541 538 ntBASIC15.78■□□□□ 0.12
Sh3yl1O08641 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3yl1O08641 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms