Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
AlyrefO08583 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
AlyrefO08583 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.74■□□□□ 0.27
AlyrefO08583 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.74■□□□□ 0.27
AlyrefO08583 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.74■□□□□ 0.27
AlyrefO08583 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
AlyrefO08583 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
AlyrefO08583 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
AlyrefO08583 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.74■□□□□ 0.27
AlyrefO08583 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.73■□□□□ 0.27
AlyrefO08583 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.73■□□□□ 0.27
AlyrefO08583 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.73■□□□□ 0.27
AlyrefO08583 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AlyrefO08583 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
AlyrefO08583 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
AlyrefO08583 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.73■□□□□ 0.27
AlyrefO08583 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
AlyrefO08583 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
AlyrefO08583 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.72■□□□□ 0.27
AlyrefO08583 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.72■□□□□ 0.27
AlyrefO08583 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.72■□□□□ 0.27
AlyrefO08583 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
AlyrefO08583 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.72■□□□□ 0.27
AlyrefO08583 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
AlyrefO08583 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.71■□□□□ 0.27
AlyrefO08583 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
AlyrefO08583 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.71■□□□□ 0.27
AlyrefO08583 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.71■□□□□ 0.27
AlyrefO08583 Gm27867-201ENSMUST00000184778 125 ntBASIC16.71■□□□□ 0.27
AlyrefO08583 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.71■□□□□ 0.27
AlyrefO08583 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
AlyrefO08583 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.71■□□□□ 0.27
AlyrefO08583 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
AlyrefO08583 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
AlyrefO08583 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
AlyrefO08583 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
AlyrefO08583 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.7■□□□□ 0.26
AlyrefO08583 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Gm15173-201ENSMUST00000122049 433 ntBASIC16.7■□□□□ 0.26
AlyrefO08583 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
AlyrefO08583 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms