Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim34bJ3QNR8 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.27■□□□□ 0.84
Trim34bJ3QNR8 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim34bJ3QNR8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim34bJ3QNR8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Gm44454-201ENSMUST00000198541 138 ntBASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim34bJ3QNR8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Gm15165-201ENSMUST00000118140 502 ntBASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim34bJ3QNR8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Gm11452-201ENSMUST00000122376 690 ntBASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Gm27867-201ENSMUST00000184778 125 ntBASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim34bJ3QNR8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim34bJ3QNR8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim34bJ3QNR8 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim34bJ3QNR8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim34bJ3QNR8 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms