Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC30.12■■■□□ 2.41
Ccdc180J3QNE4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Gm19439-201ENSMUST00000198195 2273 ntBASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Gm11764-201ENSMUST00000120221 623 ntBASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Gm9727-201ENSMUST00000161387 555 ntBASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
Ccdc180J3QNE4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Gm15467-201ENSMUST00000120582 445 ntBASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
Ccdc180J3QNE4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ccdc180J3QNE4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Gm14494-201ENSMUST00000118786 435 ntBASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ccdc180J3QNE4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC30.07■■■□□ 2.41
Ccdc180J3QNE4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Gm6184-201ENSMUST00000120403 1261 ntBASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ccdc180J3QNE4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Gm27628-201ENSMUST00000184911 107 ntBASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Ddx41-204ENSMUST00000224765 2199 ntBASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ccdc180J3QNE4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC30.05■■■□□ 2.4
Ccdc180J3QNE4 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ccdc180J3QNE4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ccdc180J3QNE4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms