Protein–RNA interactions for Protein: J3QM54

Gm3727, Predicted gene 3727, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3727J3QM54 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm3727J3QM54 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Gm12821-201ENSMUST00000120022 600 ntBASIC14.16□□□□□ -0.14
Gm3727J3QM54 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Zfp783-201ENSMUST00000095946 670 ntBASIC14.16□□□□□ -0.14
Gm3727J3QM54 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Gm3727J3QM54 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Gm3727J3QM54 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Gm3727J3QM54 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.14□□□□□ -0.15
Gm3727J3QM54 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.14□□□□□ -0.15
Gm3727J3QM54 Gm2399-201ENSMUST00000104944 225 ntBASIC14.14□□□□□ -0.15
Gm3727J3QM54 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Gm42778-201ENSMUST00000199644 553 ntBASIC14.14□□□□□ -0.15
Gm3727J3QM54 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Gm3727J3QM54 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Gm3727J3QM54 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms