Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Cldn20G5E8X0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cldn20G5E8X0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Gm10138-203ENSMUST00000206952 366 ntBASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cldn20G5E8X0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn20G5E8X0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn20G5E8X0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn20G5E8X0 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.46□□□□□ -0.1
Cldn20G5E8X0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Cldn20G5E8X0 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Gm18666-201ENSMUST00000190039 958 ntBASIC14.45□□□□□ -0.1
Cldn20G5E8X0 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cldn20G5E8X0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Gm5643-201ENSMUST00000117081 966 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Gm15375-201ENSMUST00000119510 849 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Gm13168-201ENSMUST00000121771 632 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Mir2861-201ENSMUST00000175539 82 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cldn20G5E8X0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms