Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Gm27801-201ENSMUST00000184174 223 ntBASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trim55G3X8Y1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Gm43173-201ENSMUST00000202246 593 ntBASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trim55G3X8Y1 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trim55G3X8Y1 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trim55G3X8Y1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Gm5297-201ENSMUST00000198555 1171 ntBASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trim55G3X8Y1 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms