Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh11xF6ZNL5 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.34■□□□□ 0.53
Pcdh11xF6ZNL5 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Pcdh11xF6ZNL5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh11xF6ZNL5 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh11xF6ZNL5 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC18.33■□□□□ 0.52
Pcdh11xF6ZNL5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdh11xF6ZNL5 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh11xF6ZNL5 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm18101-201ENSMUST00000215769 548 ntBASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdh11xF6ZNL5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Gm18421-201ENSMUST00000204122 625 ntBASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdh11xF6ZNL5 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms