Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhb9E9Q5G2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Gm17807-201ENSMUST00000186869 298 ntBASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhb9E9Q5G2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Gm44430-201ENSMUST00000203376 995 ntBASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhb9E9Q5G2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Gm13216-201ENSMUST00000117145 591 ntBASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Gm10052-201ENSMUST00000168019 960 ntBASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Gm7729-201ENSMUST00000050143 801 ntBASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhb9E9Q5G2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Gm9103-201ENSMUST00000119371 405 ntBASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Mir3081-201ENSMUST00000175305 84 ntBASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhb9E9Q5G2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.46■□□□□ 0.71
Pcdhb9E9Q5G2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhb9E9Q5G2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms