Protein–RNA interactions for Protein: E0CXF8

BC035044, cDNA sequence BC035044, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC035044E0CXF8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.09□□□□□ -0.15
BC035044E0CXF8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
BC035044E0CXF8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
BC035044E0CXF8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
BC035044E0CXF8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.08□□□□□ -0.16
BC035044E0CXF8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.08□□□□□ -0.16
BC035044E0CXF8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
BC035044E0CXF8 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.07□□□□□ -0.16
BC035044E0CXF8 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.07□□□□□ -0.16
BC035044E0CXF8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
BC035044E0CXF8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
BC035044E0CXF8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
BC035044E0CXF8 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms