Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.67■□□□□ 0.26
Gm28043E0CXC2 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
Gm28043E0CXC2 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Gm28043E0CXC2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Gm28043E0CXC2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Gm715-201ENSMUST00000117865 831 ntBASIC16.63■□□□□ 0.25
Gm28043E0CXC2 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms