Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Usf3B2RUQ2 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Usf3B2RUQ2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Gm29518-201ENSMUST00000190858 372 ntBASIC13.81□□□□□ -0.2
Usf3B2RUQ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.81□□□□□ -0.2
Usf3B2RUQ2 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Gm18958-201ENSMUST00000174258 762 ntBASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Gm10566-201ENSMUST00000086739 996 ntBASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Usf3B2RUQ2 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.79□□□□□ -0.2
Usf3B2RUQ2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms