Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm7222-201ENSMUST00000117512 906 ntBASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Gm12260-201ENSMUST00000122447 411 ntBASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Scn7aB1AYL1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Scn7aB1AYL1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Gm27702-201ENSMUST00000184512 56 ntBASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Gm37500-201ENSMUST00000192059 1443 ntBASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn7aB1AYL1 Gm37811-201ENSMUST00000192416 2601 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm5264-201ENSMUST00000190584 848 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm15590-201ENSMUST00000078419 552 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm14494-201ENSMUST00000118786 435 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm11764-201ENSMUST00000120221 623 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 AC154222.1-201ENSMUST00000223882 475 ntBASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn7aB1AYL1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn7aB1AYL1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn7aB1AYL1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Scn7aB1AYL1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Scn7aB1AYL1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn7aB1AYL1 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Scn7aB1AYL1 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn7aB1AYL1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Scn7aB1AYL1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Scn7aB1AYL1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Scn7aB1AYL1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Scn7aB1AYL1 Gm9727-201ENSMUST00000161387 555 ntBASIC21.31■■□□□ 1
Scn7aB1AYL1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Scn7aB1AYL1 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.31■■□□□ 1
Scn7aB1AYL1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC21.31■■□□□ 1
Scn7aB1AYL1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC21.31■■□□□ 1
Scn7aB1AYL1 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.31■■□□□ 1
Scn7aB1AYL1 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Scn7aB1AYL1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Scn7aB1AYL1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Scn7aB1AYL1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms