Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.38■□□□□ 0.53
Krt28A6BLY7 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Gm25911-201ENSMUST00000157621 56 ntBASIC18.38■□□□□ 0.53
Krt28A6BLY7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.38■□□□□ 0.53
Krt28A6BLY7 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Krt28A6BLY7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Gm4459-201ENSMUST00000118750 468 ntBASIC18.37■□□□□ 0.53
Krt28A6BLY7 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.37■□□□□ 0.53
Krt28A6BLY7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Krt28A6BLY7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm14057-201ENSMUST00000120631 482 ntBASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.36■□□□□ 0.53
Krt28A6BLY7 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Krt28A6BLY7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.35■□□□□ 0.53
Krt28A6BLY7 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Mir3113-201ENSMUST00000175478 76 ntBASIC18.35■□□□□ 0.53
Krt28A6BLY7 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.35■□□□□ 0.53
Krt28A6BLY7 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Krt28A6BLY7 Gm10175-201ENSMUST00000086013 645 ntBASIC18.35■□□□□ 0.53
Krt28A6BLY7 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Krt28A6BLY7 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt28A6BLY7 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt28A6BLY7 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Krt28A6BLY7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Krt28A6BLY7 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.33■□□□□ 0.52
Krt28A6BLY7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Krt28A6BLY7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms