Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ccdc112A0AUP1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Ccdc112A0AUP1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Odf3b-204ENSMUST00000227834 930 ntBASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ccdc112A0AUP1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Gm29257-201ENSMUST00000186115 639 ntBASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.93■□□□□ 0.62
Ccdc112A0AUP1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms