Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Igkv3-5A0A140T8M6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm4974-201ENSMUST00000209974 875 ntBASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 AC166341.7-201ENSMUST00000221698 126 ntBASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Gm18025-201ENSMUST00000221733 862 ntBASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Igkv3-5A0A140T8M6 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Igkv3-5A0A140T8M6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm26917-202ENSMUST00000192833 3329 ntBASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Igkv3-5A0A140T8M6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Gm16499-203ENSMUST00000204633 2177 ntBASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Igkv3-5A0A140T8M6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms