Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap99A0A140LIX9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap99A0A140LIX9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap99A0A140LIX9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Mzt1-203ENSMUST00000227948 952 ntBASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap99A0A140LIX9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap99A0A140LIX9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC19.77■□□□□ 0.76
Cfap99A0A140LIX9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms