Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Ccdc194A0A140LIT1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc194A0A140LIT1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc194A0A140LIT1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Ccdc194A0A140LIT1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc194A0A140LIT1 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Ccdc194A0A140LIT1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Ccdc194A0A140LIT1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Gm7791-201ENSMUST00000219066 539 ntBASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.5■□□□□ 0.23
Ccdc194A0A140LIT1 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Odf3b-204ENSMUST00000227834 930 ntBASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Ccdc194A0A140LIT1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc194A0A140LIT1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms