Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm715-201ENSMUST00000117865 831 ntBASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm8520-201ENSMUST00000186517 868 ntBASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav15d-2-dv6d-2A0A0G2JGQ7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm21814-202ENSMUST00000203277 873 ntBASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms