Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm43548-201ENSMUST00000197139 2353 ntBASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm13216-201ENSMUST00000117145 591 ntBASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav9n-2A0A0G2JDP3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms