Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Mir5130-201ENSMUST00000175160 84 ntBASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Gm45058-201ENSMUST00000205810 766 ntBASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trbv13-1A0A0B4J1P8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm7638-201ENSMUST00000121348 967 ntBASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mir8112-201ENSMUST00000184382 131 ntBASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Trbv13-1A0A0B4J1P8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms