Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Zfp783-201ENSMUST00000095946 670 ntBASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Trav4-3A0A0B4J1K1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm2399-201ENSMUST00000104944 225 ntBASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm13234-201ENSMUST00000120010 747 ntBASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC11.34□□□□□ -0.59
Trav4-3A0A0B4J1K1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav4-3A0A0B4J1K1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav4-3A0A0B4J1K1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav4-3A0A0B4J1K1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms