Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm7153-201ENSMUST00000117092 455 ntBASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Birc2-201ENSMUST00000054878 378 ntBASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv5-43A0A0B4J1J2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm24589-201ENSMUST00000116692 94 ntBASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Gm44454-201ENSMUST00000198541 138 ntBASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv5-43A0A0B4J1J2 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Igkv5-43A0A0B4J1J2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms