Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm7290-201ENSMUST00000104990 617 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm12918-201ENSMUST00000120234 636 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm15710-201ENSMUST00000121821 636 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm5075-201ENSMUST00000196916 622 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm10138-203ENSMUST00000206952 366 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trbv20A0A0B4J1H5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Prob1-201ENSMUST00000097619 3021 ntBASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm18671-201ENSMUST00000214826 683 ntBASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trbv20A0A0B4J1H5 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Gm15375-201ENSMUST00000119510 849 ntBASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trbv20A0A0B4J1H5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm26524-201ENSMUST00000192339 390 ntBASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Gm5408-201ENSMUST00000197998 747 ntBASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trbv20A0A0B4J1H5 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms