Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav6d-5A0A075B6B9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm27000-201ENSMUST00000182943 842 ntBASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm37025-201ENSMUST00000195159 829 ntBASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm2559-201ENSMUST00000201323 363 ntBASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6d-5A0A075B6B9 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6d-5A0A075B6B9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Asic1-205ENSMUST00000228185 1818 ntBASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav6d-5A0A075B6B9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Gm18025-201ENSMUST00000221733 862 ntBASIC13.4□□□□□ -0.26
Trav6d-5A0A075B6B9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms