Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav6n-6A0A075B6B2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm11249-201ENSMUST00000117071 859 ntBASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav6n-6A0A075B6B2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Trav6n-6A0A075B6B2 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Mir6349-201ENSMUST00000184059 97 ntBASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Gm27275-201ENSMUST00000184318 272 ntBASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav6n-6A0A075B6B2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Gm10418-201ENSMUST00000100943 576 ntBASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Gm13168-201ENSMUST00000121771 632 ntBASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Gm10653-202ENSMUST00000139570 835 ntBASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 AC112142.1-201ENSMUST00000228796 918 ntBASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav6n-6A0A075B6B2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav6n-6A0A075B6B2 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms