Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav12-3A0A075B648 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav12-3A0A075B648 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gm11421-201ENSMUST00000122124 294 ntBASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gm18755-201ENSMUST00000218030 1099 ntBASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gm5921-201ENSMUST00000075898 882 ntBASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav12-3A0A075B648 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav12-3A0A075B648 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms