Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm27357-201ENSMUST00000183754 135 ntBASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav5-1A0A075B5Z7 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm10052-201ENSMUST00000168019 960 ntBASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm7729-201ENSMUST00000050143 801 ntBASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav5-1A0A075B5Z7 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Mir3081-201ENSMUST00000175305 84 ntBASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Ank2-226ENSMUST00000189368 339 ntBASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav5-1A0A075B5Z7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm9103-201ENSMUST00000119371 405 ntBASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Gm18669-201ENSMUST00000216049 778 ntBASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav5-1A0A075B5Z7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms